BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023B12SP1|AL428016
(1006 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1701 1926 0.0
>3x_Contig1701
Length = 10926
Score = 1926 bits (971), Expect = 0.0
Identities = 1000/1005 (99%), Gaps = 4/1005 (0%)
Strand = Plus / Plus
Query: 1 gatcattggatgcattatgttgggcagtactaaggctttcaatgctatcgtatctgctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gatcattggatgcattatgttgggcagtactaaggctttcaatgctatcgtatctgctgc 405
Query: 61 agtgacgcttttaattgtgtcatatgctattcctagtttgattttactggttagaggcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 agtgacgcttttaattgtgtcatatgctattcctagtttgattttactggttagaggcag 465
Query: 121 gaacaaatttattgcaaagtgtgaaagggaaactgcaaatgagacggatattgtaccaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gaacaaatttattgcaaagtgtgaaagggaaactgcaaatgagacggatattgtaccaaa 525
Query: 181 taaatactccatgtggcttaaaaaatggggtgtgatcccacatacactaacagtagcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 taaatactccatgtggcttaaaaaatggggtgtgatcccacatacactaacagtagcata 585
Query: 241 cgcattgttttgtgttgttatgttgtctttcccttatgtgaaaccagttacctcttccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 cgcattgttttgtgttgttatgttgtctttcccttatgtgaaaccagttacctcttccaa 645
Query: 301 catgaactacgtctcagtcgtttatggtgctattgccttgataattgggttagttatatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 catgaactacgtctcagtcgtttatggtgctattgccttgataattgggttagttatatt 705
Query: 361 gctgtttaatagcatcccgtaaataaagcgaagtccgcgaacttggacattacttctaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gctgtttaatagcatcccgtaaataaagcgaagtccgcgaacttggacattacttctaat 765
Query: 421 tgataagagacagtagctgagcctatagcagggatcttatccactgctggatcaggaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 tgataagagacagtagctgagcctatagcagggatcttatccactgctggatcaggaaca 825
Query: 481 ttatttgtaatcttttcagggttcgcttttgctttttcgtgttttattttcatctttttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 ttatttgtaatcttttcagggttcgcttttgctttttcgtgttttattttcatctttttt 885
Query: 541 ttttaccgtcatcttaaaattgttcacagtgtccacaggcgaaactggggcgccaacaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 ttttaccgtcatcttaaaattgttcacagtgtccacaggcgaaactggggcgccaacaac 945
Query: 601 acttcgcaccttctatatgcttttctacgcctctatattttactgcaggggaatattgct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 acttcgcaccttctatatgcttttctacgcctctatattttactgcaggggaatattgct 1005
Query: 661 cgaacaatgttcaacaacgtttattcaccttcctgcatagaatttcatacaaaaaaaagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 cgaacaatgttcaacaacgtttattcaccttcctgcatagaatttcatacaaaaaaaagt 1065
Query: 721 cttttgtatagttgagcagtttaccaacacaagcagaagcttgaatctgcacctcttgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1066 cttttgtatagttgagcagtttaccaacacaagcagaagcttgaatctgcacctcttgtt 1125
Query: 781 agaagactttcttagttactcagttaatttctttcaaaatttccgagatttctagattat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1126 agaagactttcttagttactcagttaatttctttcaaaatttccgagatttctagattat 1185
Query: 841 atccttcagttccgacatcctggtctctttgactgttgttctctcaaatggcgaatcgca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1186 atccttcagttccgacatcctggtctctttgactgttgttctctcaaatggcgaatcgca 1245
Query: 901 tgctaagtagtatcgacactagagacttgttatagagggttagtagaa-twacattgttg 959
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 1246 tgctaagtagtatcgacactagagacttgttatagagggttagtagaattaacattgttg 1305
Query: 960 ctcagggatg-aaagtagag-ttcgacttctat-atatactgttt 1001
|||||||||| ||||||||| |||||||||||| |||||||||||
Sbjct: 1306 ctcagggatgaaaagtagagtttcgacttctataatatactgttt 1350
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8211
Number of Sequences: 1807
Number of extensions: 8211
Number of successful extensions: 68
Number of sequences better than 1.0e-20: 1
length of query: 1006
length of database: 10,358,551
effective HSP length: 16
effective length of query: 990
effective length of database: 10,329,639
effective search space: 10226342610
effective search space used: 10226342610
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)